Gene detail information of Glyur003696s00044278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15140.1 | 1.00E-87 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| NR | XP_004511251.1 | 1.67E-160 | PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140-like [Cicer arietinum] |
| COG | YP_007132753.1 | 2.00E-08 | Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera PCC 7437] |
| Swissprot | tr|Q8W566|Y3514_ARATH | 1.00E-108 | Uncharacterized exonuclease domain-containing protein At3g15140 |
| trEMBL | tr|I1KDP8|I1KDP8_SOYBN | 7.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G35090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03696 | 5538 | 9457 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.367 |
| SRR1783600 | control | 10.325 |
| SRR1783602 | moderate drought stress | 7.388 |
| SRR1811619 | moderate drought stress | 7.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.341 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.230 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.031 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.771 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.030 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.974 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.627 |
| SRR2868004 | Drought Stress (root) | 2.671 |
| SRR2967015 | Control (root) | 2.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.329 |
| SRR9715740 | Leaf | 2.156 |
| SRR9715741 | Leaf | 2.415 |
| SRR9715739 | Root | 3.483 |
| SRR9715742 | Root | 2.907 |
| SRR9715743 | Root | 3.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.926 |
| SRR8749028 | MeJA induced 9h | 8.081 |
| SRR8749029 | MeJA induced 9h | 15.518 |
| SRR8749030 | Uninduced | 2.049 |
| SRR8749031 | Uninduced | 1.478 |
| SRR8749032 | Uninduced | 2.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.907 |
| SRR8400027 | Control - Root | 6.881 |