Gene detail information of Glyur003687s00040907 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004506707.1 | 6.39E-35 | PREDICTED: uncharacterized protein LOC101488550 [Cicer arietinum] |
| trEMBL | tr|G7LFL3|G7LFL3_MEDTR | 6.00E-20 | DUF223 domain protein {ECO:0000313|EMBL:AET04000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03687 | 7263 | 9374 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.114 |
| SRR1783600 | control | 2.764 |
| SRR1783602 | moderate drought stress | 7.868 |
| SRR1811619 | moderate drought stress | 7.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.638 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.959 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.024 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.692 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.618 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.664 |
| SRR2868004 | Drought Stress (root) | 0.939 |
| SRR2967015 | Control (root) | 0.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.244 |
| SRR9715740 | Leaf | 0.317 |
| SRR9715741 | Leaf | 0.301 |
| SRR9715739 | Root | 0.236 |
| SRR9715742 | Root | 2.613 |
| SRR9715743 | Root | 1.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.032 |
| SRR8749028 | MeJA induced 9h | 0.716 |
| SRR8749029 | MeJA induced 9h | 0.265 |
| SRR8749030 | Uninduced | 0.166 |
| SRR8749031 | Uninduced | 0.022 |
| SRR8749032 | Uninduced | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.225 |
| SRR8400027 | Control - Root | 7.124 |