Gene detail

Gene detail information of Glyur003674s00040741

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G60010.1	0	ferric reductase-like transmembrane component family protein
NR	XP_004492338.1	0	PREDICTED: putative respiratory burst oxidase homolog protein H-like [Cicer arietinum]
COG	YP_007146260.1	4.00E-52	putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprot	tr\|Q9FJD6\|RBOHH_ARATH	0	Putative respiratory burst oxidase homolog protein H
trEMBL	tr\|A0A072U175\|A0A072U175_MEDTR	0	Respiratory burst oxidase-like protein {ECO:0000313\|EMBL:KEH22868.1}

Sequence

Transcript Sequence

>Glyur003674s00040741.1
CTCTCTTTCTCTCTCTCAAATCCTATTTTTGACTATTTCAAGCTTTCCCTCTAATACCCTTCTCCCTTAACAATTCCAAAAGCATCACCATTGGCACTCTTTTGGCCTTTTTGTTTTTGTTTTTTTCATTATCATTCCCCAGTTCCAATTAATTCACCTGATTCAACAAAACTTGGCAATCCCTTCAATTGATGTCAAAAGAAAAAGAATTAGGCAGCACTGATGAATCATCAAAGTGGATTCTTGAGAGCATTGAGATTGTTGATCCCAATGTGGAAGTTCCTAATAATAACAATAAAAATGATATTTTTCTTGGACCCCATGAAAGCACGGTGGTGAAAGCTCCCAGTTTGAACAACAACAATGTGAGGAGCAGGGTGAACAATAATGGGTTTCAAGGTGGGGGCATGATGACGAGGATGCAATCAGGAGCTGCAAGAGGGCTTAAGGGTTTACGGTTCCTTGATAGAACGGTTACAGGGAAAGAAGCTGATGCATGGAAGTCCATTGAGAAGCGNTTCTCTCAGAATGCAGTTGATGGGAAGCTCTCAAAAGACAAATTTGGAACATGCATGGGCATGGGGGCAGATTCAAAGGATTTTGCTGGGGAACTTTATGAGGCCTTGGCAAGGCGCAGGAAAATCTGTGCAGAAAAAGGAATAACTTTGGATGAAGTTAGAGTATTCTGGGAGGACATGACTAACAAAGATCTTGAATCAAGACTTCAAGTGTTCTTTGACATGTGTGACAAGAATGGGGATGGTAGGCTATCAGAAGAGGAGGTTCAGGAGATGTGGCAGCTAGAGACTCTACTAAGGCAAATGGTTAGTGCTGAAGATGGCACCACAAAACTTTGTCCTAGAACNCAGACTTTGACTAGAGCTATGATACCAAAAAAGTATAGAACTCCTGTTAACAAATTTATCTCTACAACCACAGAATTCGCGATNGATAAATGGAAAAAAATATGGGTTATCACACTTTGGTTAGTCATAAACTTGGTGCTTTTCATTTGGAAGTATCAACAATACANGGAGAGAGCAGCATATGAAGTCATGGGATCCTGTCTCTGCTTTGCAAAGGGTGCNGCTGAGACTCTCAAGTTCAACATGGCTCTCATTGTCCTCACCATGTGCAGAAGAACTCTTACAAAGCTAAGAGGAACATTCCTTAGCCAAATCATCCCTTTTGATGACAACATAAACTTCCACAAGATCATTGCAGTTGCTGTAGTTATAGGGACATTAATTCATGTAGGAATGCATGTCACTTGTGATTTCCCAAGAATCATATCATGCCCAAAAGAAAAGTTCATGAGCACACTTGGGCCAGGTTTCGACTTTGAGCAGCCTACTTACCTGACCCTTGTTGAAAGTATTCCTGGTGTGACTGGAATCTTCATGGTCTTGATTATGGCCTTTACCTTCACTCTGGCAACACATTATTTCAGAAAGAATGTTGTCAATTTGCCTTCCCCATTGCACCGTTTGGCTGGTTTCAATGCCTTTTGGTATGCACATCATTTGCTTATTCTGGTGTACATACTCCTGATCATACATGGATACTTTCTATTCCTCAACAAGGACTGGCGTAAGAAGACGACTTGGATGTACCTTGTAGTTCCACTAGTACTCTATGCTTTTGAGAGGGTTCATCCATTTTTTAGGGGTAANGATCACCGTGTGAGCATCATTAAGGCAATAATATACACAGGAAATGTTCTAGCACTATACATGACCAAACCNTCCGGATTCAAGTATAAAAGCGGAATGTACATTTTTGTTAAGTGCCCAGATATATCTAAATTTGAATGGCATCCTTTCTCCATCACCTCTGCACCTGGAGATGACTACTTGAGTGTCCATATAAGAACCTTGGGAGATTGGACTACAGAGCTTAGAAACACATTTGCAAAGGCTTGTGAGCCTCAGAGTGCACAACCAAGAAGGGGAAGCCTTATGAGGATGGAAACTAGAGCACAATCAAGCTATGACCATTCCAATCCCAATTCCAATTCCACACCAAGCGTTAGATATCCAAAGATCCTCGTCAAAGGACCCTATGGAGCCCCAGCACAAAACTATAACCGTTATGATGTCCTCTTGCTCATAGGTCTAGGAATCGGGGCCACGCCAATGATCAGTATCTTGAAAGATATCTTGAACCACATGAAGAAGGAAAGCCCTCAAAAAGCTTCATTTGAATGGTTCAAAGGTGTCATGGATGATATTGCAGAATATGACCGTGATGGTGTTATAGAAATGCACAACTATTTGACTAGTGTCTATGAGGAAGGTGATGCACGGTCTGCACTTATNGCCATGATTCAGAAGCTGCAACATGCTAAAAATGGAGTTGATGTAGTTTCAGAAAGCCGGGTGTATTCTACTGTGGAAGTCCTACTCTTACAAAAACACTCAAGGACCTTTGTCAAGAGTTCAGCCTAAACTCATCTACCCGCTTTCAATTTCACAAAGAGAACTTCTAAAGAAGCATTTCACACATAGCATCAATCCTGAATATTNTCTGTTGTCACACCCTGCTTCATTAAGCAGCAACAGAAGACTGTAGAATCTTTTGTTATAGCCATAGTTTAGTGAGTTTGGATTAAAANTTTTTGTAAGTTTCTTGTATGAAGTAAGATTTTCATAGAAGTTGTGTTGGTTTTCCCCTTTCACCTTTATCTTGGTCCATTATTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03674	1468	6922	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0005509 calcium ion binding

GO:0016491 oxidoreductase activity

GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003674s00040741.1	PF08414.5	NADPH_Ox	74	175	2.90E-31
Glyur003674s00040741.1	PF01794.14	Ferric_reduct	298	454	7.40E-15
Glyur003674s00040741.1	PF08022.7	FAD_binding_8	498	627	1.30E-26
Glyur003674s00040741.1	PF08030.7	NAD_binding_6	634	729	2.90E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.553
SRR1783600	control	4.489
SRR1783602	moderate drought stress	3.590
SRR1811619	moderate drought stress	3.386

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.488
DRR006520	Root Summer glycyrrhizin high producing strain	8.477
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	2.853
DRR006524	Root Summer glycyrrhizin low producing strain	2.862
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.524
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.653

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.129
SRR2868004	Drought Stress (root)	16.787
SRR2967015	Control (root)	15.188

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.079
SRR9715740	Leaf	0.093
SRR9715741	Leaf	0.039
SRR9715739	Root	0.419
SRR9715742	Root	2.820
SRR9715743	Root	2.342

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.307
SRR8749028	MeJA induced 9h	1.474
SRR8749029	MeJA induced 9h	0.407
SRR8749030	Uninduced	0.265
SRR8749031	Uninduced	0.038
SRR8749032	Uninduced	0.039

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.878
SRR8400027	Control - Root	7.605