Gene detail information of Glyur003663s00043841 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08230.1 | 3.00E-28 | glycine-rich protein |
| NR | XP_004490280.1 | 3.19E-72 | PREDICTED: selenoprotein K-like [Cicer arietinum] |
| trEMBL | tr|C6T2V4|C6T2V4_SOYBN | 8.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G02750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03663 | 2835 | 6513 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003663s00043841.1 | PF10961.3 | DUF2763 | 62 | 146 | 3.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.722 |
| SRR1783600 | control | 41.926 |
| SRR1783602 | moderate drought stress | 34.727 |
| SRR1811619 | moderate drought stress | 34.643 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 61.263 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 63.737 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.114 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.759 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 54.539 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 62.561 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 153.057 |
| SRR2868004 | Drought Stress (root) | 141.693 |
| SRR2967015 | Control (root) | 133.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 105.239 |
| SRR9715740 | Leaf | 92.394 |
| SRR9715741 | Leaf | 103.404 |
| SRR9715739 | Root | 33.543 |
| SRR9715742 | Root | 43.292 |
| SRR9715743 | Root | 38.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.513 |
| SRR8749028 | MeJA induced 9h | 25.485 |
| SRR8749029 | MeJA induced 9h | 56.353 |
| SRR8749030 | Uninduced | 48.577 |
| SRR8749031 | Uninduced | 70.930 |
| SRR8749032 | Uninduced | 58.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.027 |
| SRR8400027 | Control - Root | 84.362 |