Gene detail information of Glyur003662s00040196 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11500.1 | 3.00E-88 | |
| NR | XP_004501186.1 | 9.79E-152 | PREDICTED: coiled-coil domain-containing protein 25-like [Cicer arietinum] |
| trEMBL | tr|V7AV75|V7AV75_PHAVU | 7.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:ESW09175.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03662 | 6845 | 10474 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003662s00040196.1 | PF05670.8 | DUF814 | 11 | 99 | 3.10E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.167 |
| SRR1783600 | control | 39.510 |
| SRR1783602 | moderate drought stress | 35.555 |
| SRR1811619 | moderate drought stress | 35.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 59.170 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 58.460 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.941 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.951 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 72.697 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.187 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.508 |
| SRR2868004 | Drought Stress (root) | 65.094 |
| SRR2967015 | Control (root) | 57.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.681 |
| SRR9715740 | Leaf | 65.582 |
| SRR9715741 | Leaf | 62.021 |
| SRR9715739 | Root | 7.684 |
| SRR9715742 | Root | 35.983 |
| SRR9715743 | Root | 31.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 124.985 |
| SRR8749028 | MeJA induced 9h | 91.265 |
| SRR8749029 | MeJA induced 9h | 145.459 |
| SRR8749030 | Uninduced | 107.863 |
| SRR8749031 | Uninduced | 186.360 |
| SRR8749032 | Uninduced | 145.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.320 |
| SRR8400027 | Control - Root | 52.713 |