Gene detail information of Glyur003661s00041727 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17880.1 | 1.00E-18 | disease resistance protein (TIR-NBS-LRR class) |
| NR | KHN26393.1 | 0 | TMV resistance protein N [Glycine soja] |
| COG | YP_001911260.1 | 5.00E-10 | HpaF leucine rich hrp associated protein [Xanthomonas oryzae pv. oryzae PXO99A] |
| Swissprot | tr|Q40392|TMVRN_NICGU | 3.00E-19 | TMV resistance protein N |
| trEMBL | tr|K7KYE4|K7KYE4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G46665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03661 | 15650 | 20548 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.685 |
| SRR1783600 | control | 1.821 |
| SRR1783602 | moderate drought stress | 2.643 |
| SRR1811619 | moderate drought stress | 2.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.337 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.472 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.150 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.433 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.134 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.404 |
| SRR2868004 | Drought Stress (root) | 1.044 |
| SRR2967015 | Control (root) | 0.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.337 |
| SRR9715740 | Leaf | 0.789 |
| SRR9715741 | Leaf | 0.619 |
| SRR9715739 | Root | 0.096 |
| SRR9715742 | Root | 2.008 |
| SRR9715743 | Root | 1.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.207 |
| SRR8749028 | MeJA induced 9h | 0.028 |
| SRR8749029 | MeJA induced 9h | 0.164 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.987 |
| SRR8400027 | Control - Root | 2.216 |