Gene detail information of Glyur003623s00040043 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18130.1 | 4.00E-28 | |
| NR | NP_001239693.1 | 9.50E-92 | uncharacterized protein LOC100810509 [Glycine max] |
| trEMBL | tr|C6T9U3|C6T9U3_SOYBN | 4.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G07990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03623 | 13958 | 16270 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.552 |
| SRR1783600 | control | 53.985 |
| SRR1783602 | moderate drought stress | 83.958 |
| SRR1811619 | moderate drought stress | 84.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 31.221 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 30.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 154.630 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 147.738 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 62.127 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 61.792 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 98.907 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 97.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.666 |
| SRR2868004 | Drought Stress (root) | 23.613 |
| SRR2967015 | Control (root) | 31.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.980 |
| SRR9715740 | Leaf | 73.153 |
| SRR9715741 | Leaf | 59.718 |
| SRR9715739 | Root | 2.365 |
| SRR9715742 | Root | 8.739 |
| SRR9715743 | Root | 7.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.254 |
| SRR8749028 | MeJA induced 9h | 69.106 |
| SRR8749029 | MeJA induced 9h | 13.527 |
| SRR8749030 | Uninduced | 22.456 |
| SRR8749031 | Uninduced | 35.590 |
| SRR8749032 | Uninduced | 18.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.041 |
| SRR8400027 | Control - Root | 17.755 |