Gene detail information of Glyur003600s00047911 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24130.1 | 5.00E-53 | Protein of unknown function, DUF538 |
| NR | ACJ83938.1 | 2.70E-85 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FGQ9|B7FGQ9_MEDTR | 1.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:AFK36807.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03600 | 9831 | 10310 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003600s00047911.1 | PF04398.7 | DUF538 | 22 | 136 | 2.70E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 129.640 |
| SRR1783600 | control | 132.767 |
| SRR1783602 | moderate drought stress | 97.768 |
| SRR1811619 | moderate drought stress | 98.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.244 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.271 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.775 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.900 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.239 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 113.058 |
| SRR2868004 | Drought Stress (root) | 83.115 |
| SRR2967015 | Control (root) | 66.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.186 |
| SRR9715740 | Leaf | 23.332 |
| SRR9715741 | Leaf | 23.921 |
| SRR9715739 | Root | 96.011 |
| SRR9715742 | Root | 62.935 |
| SRR9715743 | Root | 71.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.088 |
| SRR8749028 | MeJA induced 9h | 47.480 |
| SRR8749029 | MeJA induced 9h | 3.140 |
| SRR8749030 | Uninduced | 81.497 |
| SRR8749031 | Uninduced | 103.182 |
| SRR8749032 | Uninduced | 30.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 352.566 |
| SRR8400027 | Control - Root | 348.158 |