Gene detail

Gene detail information of Glyur003598s00040474

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G07050.1	2.00E-133	nodulin MtN21 /EamA-like transporter family protein
NR	XP_003545806.1	0	PREDICTED: WAT1-related protein At5g07050-like [Glycine max]
Swissprot	tr\|Q9FL41\|WTR38_ARATH	0	WAT1-related protein At5g07050
trEMBL	tr\|I1MIL1\|I1MIL1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G36200.1}

Sequence

Transcript Sequence

>Glyur003598s00040474.1
CTTTTAATTATTCTCAACACTAATTCCTTATATCTCCTTCTCAAAAGCATAAGAAAAAAAATGGCCATTGAAAAGCTTGGATGTTGTACAAATTTCCTTGAGAAATCTAAATACCATTTTGCCATGATTTGTTTACAATTTGGCTATGCGGGTATGAACATTATCACTAAGGTTTCCCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTTTATCGCCACGCCTTCGCAACCGCCGTGGTAGCTCCATTTGCATTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCGAATTTTCATGCAAATTTTCATCCTAGCTCTCCTCGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACGTGCTTCCAGCCATGACTTTTGTTATGGCAATTTTATGCCGGATGGAGAAGATAAACATAAAGAAGGTGAGATGCCAAGCAAAGATAGTGGGAACAATAGTGACAGTGGCAGGGGCAATGCTGATGACCTTATACAAAGGCCCTGTAGTGGAAATGATATGGGCCAAACATGCCCATGATCCTCAAGACAACACACATGCATCAAGCACCACCACAGGATCCTCCGACAAAGATTGGTTCTTAGGATGCACCTTCCTTATCATTGCCACCCTTGCCTGGGCTTCCCTCTTTGTTTTGCAAGCAAAAGCTATAGAGACGTACAAGAGTCATCAGCTAAGCCTCACTTCACTCATGTGCTTCATTGGCACTCTTCAAGCTGTTGCTGTTACTTTTGTTGTGGAGCACAATCCTTCTGTATGGAGGATTGGCTGGGATATGAGTTTACTTGCTGCTGCCTATGCTGGGATTGTGACCTCAAGCCTATCATACTATGTTCAAGGGCTGGTGATTAACAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCTCTTATGATGATCATAGTTGCTATCATGGGCTCCTTTATGCTTGCAGAACAGATTTATCTTGGAGGTGTGATCGGTGCCATCTTGATTGTCATAGGCTTATACTCTGTTCTGTGGGGAAAGCACAGAGAACAAATAGAGAGAAAAGTAGATGATATTCCATTGCCTGTAAAGGGTGCTCAAGTGGCTGGAAATGCAGAATCAGTGATTGATGCCACTGATCAATTCACTAATGAAGTAAAATCTGGTCAGAGAGGAGAAGCCAACAACAATCGCTCTTCGGTTGTAATAAGCATGCCTACTAGAGAGACTCCAAGAGTTTAACCAAGAAACAAAGGCTTAAGCTAATTGGAATATGAATAGGAATGGTGTTGTTTTCTTCATCTTTCAATATCATCCTCCATTTTGTCCCTTTTTAGCATTTTTTTTTTTTGCTTCCCCACCCCTCCCCCTTTTTGTTGTCATAAAAAGGAGCTTGTTGTATCTAAGCAAATATATATATAATTTTGTAAGAAATTCCAACTAATCCATATAGGAAAGGGAATCATAAAGTTTCTTTATCACTATCTCTCTGCCCCCTCTATCTCTTTTTTTTCTTCATGCTTATTGGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03598	7151	10099	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component

GO:0016020 membrane

GO:0016021 integral component of membrane

molecular_function
GO:0022857 transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003598s00040474.1	PF00892.15	EamA	29	159	4.40E-12
Glyur003598s00040474.1	PF00892.15	EamA	207	336	5.80E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.379
SRR1783600	control	13.536
SRR1783602	moderate drought stress	6.507
SRR1811619	moderate drought stress	6.483

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	26.582
DRR006520	Root Summer glycyrrhizin high producing strain	25.534
DRR006521	Root Winter glycyrrhizin high producing strain	2.725
DRR006522	Root Winter glycyrrhizin high producing strain	2.620
DRR006523	Root Summer glycyrrhizin low producing strain	38.876
DRR006524	Root Summer glycyrrhizin low producing strain	39.390
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.963
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.963

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	104.385
SRR2868004	Drought Stress (root)	140.995
SRR2967015	Control (root)	202.779

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.202
SRR9715740	Leaf	7.032
SRR9715741	Leaf	2.984
SRR9715739	Root	3.269
SRR9715742	Root	11.257
SRR9715743	Root	9.488

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.162
SRR8749031	Uninduced	0.051
SRR8749032	Uninduced	0.034

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.847
SRR8400027	Control - Root	7.356