Gene detail information of Glyur003575s00043191 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80530.1 | 9.00E-162 | Major facilitator superfamily protein |
| NR | XP_004488508.1 | 0 | PREDICTED: uncharacterized protein LOC101489674 [Cicer arietinum] |
| COG | YP_003701933.1 | 5.00E-08 | major facilitator superfamily protein [Syntrophothermus lipocalidus DSM 12680] |
| trEMBL | tr|A0A072V983|A0A072V983_MEDTR | 0 | Nodulin-like/MFS transporter {ECO:0000313|EMBL:KEH37893.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03575 | 14081 | 18045 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003575s00043191.1 | PF06813.8 | Nodulin-like | 12 | 259 | 1.80E-87 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.414 |
| SRR1783600 | control | 35.675 |
| SRR1783602 | moderate drought stress | 40.140 |
| SRR1811619 | moderate drought stress | 40.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.620 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 108.781 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 105.990 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 47.546 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.143 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.900 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.696 |
| SRR2868004 | Drought Stress (root) | 22.942 |
| SRR2967015 | Control (root) | 21.759 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.627 |
| SRR9715740 | Leaf | 10.419 |
| SRR9715741 | Leaf | 7.357 |
| SRR9715739 | Root | 37.196 |
| SRR9715742 | Root | 47.487 |
| SRR9715743 | Root | 42.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.575 |
| SRR8749028 | MeJA induced 9h | 14.580 |
| SRR8749029 | MeJA induced 9h | 6.042 |
| SRR8749030 | Uninduced | 2.132 |
| SRR8749031 | Uninduced | 0.179 |
| SRR8749032 | Uninduced | 0.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.434 |
| SRR8400027 | Control - Root | 53.434 |