Gene detail information of Glyur003575s00043190 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15760.1 | 3.00E-26 | Sterile alpha motif (SAM) domain-containing protein |
| NR | XP_007138471.1 | 1.31E-85 | hypothetical protein PHAVU_009G212000g [Phaseolus vulgaris] |
| trEMBL | tr|V7AYS9|V7AYS9_PHAVU | 5.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:ESW10465.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03575 | 12374 | 13138 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.191 |
| SRR1783600 | control | 0.192 |
| SRR1783602 | moderate drought stress | 0.149 |
| SRR1811619 | moderate drought stress | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.028 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.648 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.826 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.363 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.003 |
| SRR2868004 | Drought Stress (root) | 0.788 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.827 |
| SRR9715740 | Leaf | 1.000 |
| SRR9715741 | Leaf | 0.725 |
| SRR9715739 | Root | 0.065 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 583.814 |
| SRR8749028 | MeJA induced 9h | 262.131 |
| SRR8749029 | MeJA induced 9h | 243.125 |
| SRR8749030 | Uninduced | 7.603 |
| SRR8749031 | Uninduced | 4.413 |
| SRR8749032 | Uninduced | 21.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.626 |
| SRR8400027 | Control - Root | 0.551 |