Gene detail information of Glyur003569s00045380 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G37660.2 | 5.00E-72 | plasmodesmata-located protein 7 |
| NR | XP_004503125.1 | 5.38E-157 | PREDICTED: cysteine-rich repeat secretory protein 60-like [Cicer arietinum] |
| Swissprot | tr|Q0WPN8|CRR60_ARATH | 2.00E-105 | Cysteine-rich repeat secretory protein 60 (Precursor) |
| trEMBL | tr|K7MPT0|K7MPT0_SOYBN | 3.00E-143 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G04610.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03569 | 16684 | 18786 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003569s00045380.1 | PF01657.12 | Stress-antifung | 34 | 131 | 1.60E-20 |
| Glyur003569s00045380.1 | PF01657.12 | Stress-antifung | 167 | 226 | 2.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.317 |
| SRR1783600 | control | 10.526 |
| SRR1783602 | moderate drought stress | 10.723 |
| SRR1811619 | moderate drought stress | 10.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.488 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.376 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.055 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.084 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.666 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.049 |
| SRR2868004 | Drought Stress (root) | 10.610 |
| SRR2967015 | Control (root) | 16.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.423 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.098 |
| SRR9715739 | Root | 1.130 |
| SRR9715742 | Root | 7.984 |
| SRR9715743 | Root | 7.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.193 |
| SRR8749028 | MeJA induced 9h | 0.108 |
| SRR8749029 | MeJA induced 9h | 0.097 |
| SRR8749030 | Uninduced | 0.010 |
| SRR8749031 | Uninduced | 0.068 |
| SRR8749032 | Uninduced | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.721 |
| SRR8400027 | Control - Root | 25.884 |