Gene detail information of Glyur003567s00041495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58530.1 | 4.00E-59 | Glutaredoxin family protein |
| NR | XP_003544304.1 | 1.13E-125 | PREDICTED: uncharacterized protein At3g28850-like [Glycine max] |
| Swissprot | tr|Q9FLE8|Y5986_ARATH | 2.00E-36 | Uncharacterized protein At5g39865 |
| trEMBL | tr|I1MBE5|I1MBE5_SOYBN | 4.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03567 | 4282 | 6357 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003567s00041495.1 | PF00462.19 | Glutaredoxin | 118 | 184 | 8.00E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.908 |
| SRR1783600 | control | 11.697 |
| SRR1783602 | moderate drought stress | 8.151 |
| SRR1811619 | moderate drought stress | 8.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.498 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.195 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.287 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.938 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.746 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.566 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.453 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.889 |
| SRR2868004 | Drought Stress (root) | 11.709 |
| SRR2967015 | Control (root) | 17.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.912 |
| SRR9715740 | Leaf | 5.930 |
| SRR9715741 | Leaf | 5.815 |
| SRR9715739 | Root | 16.293 |
| SRR9715742 | Root | 13.415 |
| SRR9715743 | Root | 13.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.904 |
| SRR8749028 | MeJA induced 9h | 10.381 |
| SRR8749029 | MeJA induced 9h | 9.180 |
| SRR8749030 | Uninduced | 5.707 |
| SRR8749031 | Uninduced | 18.592 |
| SRR8749032 | Uninduced | 10.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.077 |
| SRR8400027 | Control - Root | 17.392 |