Gene detail

Gene detail information of Glyur003560s00045085

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G22930.1	1.00E-100	UDP-Glycosyltransferase superfamily protein
NR	KHN36711.1	0	UDP-glycosyltransferase 79B6 [Glycine soja]
Swissprot	tr\|Q53UH4\|DUSKY_IPONI	2.00E-174	Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase
trEMBL	tr\|C6TMQ0\|C6TMQ0_SOYBN	0	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU24192.1}

Sequence

Transcript Sequence

>Glyur003560s00045085.1
ACGTTGCACATAGGTCCAGCAGGAACAAAAGACAGCCAAGCCATGGATGCACCTTCTTTGCACATAGCAATGTTTCCATGGTTTGCCATGGGTCACCTAACCCCATACCTCCATNTCTCCAACAAATTAGCAAAGAGAGGACACAAAATCTCCTTCTTCATCCCCAAAAGAACACAATCCAAATTGGAGCAATTCAACCTCTACCCACACCTCATTACCTTTTTCCCCATCAATGTCCCTCACGTTAATGGCCTTCCCCATGGTGCAGAGACCACTTCAGATGTGTCTTTCTCCTTAGGTCCACTCATCATGACAGCTATGGATCTCACTGAGAGTCAAATCNAACTCCTCCTCATTCAACTAAACCCACAAATTGTTTTCTTTGATTTCACCTATTGGCTTCCCAGCTTGACTCGTCGCTTGGGGATCAAATCTTTCCAATACTTGATCGTTAGCCCAGCAACAATATCTTACACTACATGCCCAACAAGGATGCGCATCATTGGTAGTGGTGGTATATTTTTTGTGGCAAAGTACCTTGCTCAGAAAAGGAACTGGGAGTTTGGTAGCGGTGTTCTTTTCTATGACCGACTCTACAATGGTTTGAGTCTATCGGATGCAATAGGGTTTAAAGGTTGTAGAGAAATTGAAGGGCCTTATGTTGACTACATAGAAAAGCAATTTGGGAAGCCTGTTCTGCTTTCAGGACCTGTCATACCTGAACCACCCAACACTACTTTGGAGGAAAATTGGGCTACTTGGCTTGGAGGATTTAAGGATGGCTCAGTAATTTACTGTGCACTTGGAAGTGAATGGATATTACCACATGACCAGTTCCAAGAATTATTATTAGGCCTTGAGCTAACAGGTTTGCCATTTTTGGCAATTGTTAAATCTCCTATTGGGTGTGACACAATTGAAGCTGCTCTACCAGAAGGGTTCAAAGAAAGGGTTCAAGGGAAAGGGGTTGTTCACAGTGGATGGATACAACANCAACTGATTTTGGAACACCCTTCTGTGGGTTGCTTTGTAACACATTGTGGTNCTGGTTCATTAACTGAGGCACTGATAAACAAGTGTCAGATGGTGTTGCTGCCACAACTAGATGGTGATCACATCATTAATGCACGGATGATGGGTGATGGGAANTTAAAGGTTGGGGTTGAAGTGAAGAAGGGCGAAGAAGATGGCTTATTCACAAAGGAAAGTGTTTACCAAGCGGTGAAAATTGTGATGGATGATGAGAATGAGCTTGGTAGAGAAGTTAGGGCAAATCATGCCAAAGTGAAGAACCTCTTGCTAGGCCACNATTTGGAGTCGGAATGTGTTGATGATTTCTGCCAGAAGCTTCAAGATTTACTCAGGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03560	4031	5811	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003560s00045085.1	PF00201.13	UDPGT	327	415	4.80E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.802
SRR1783600	control	6.895
SRR1783602	moderate drought stress	8.175
SRR1811619	moderate drought stress	7.913

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.805
DRR006520	Root Summer glycyrrhizin high producing strain	4.741
DRR006521	Root Winter glycyrrhizin high producing strain	2.087
DRR006522	Root Winter glycyrrhizin high producing strain	2.140
DRR006523	Root Summer glycyrrhizin low producing strain	0.292
DRR006524	Root Summer glycyrrhizin low producing strain	0.250
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.440
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.319

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	15.723
SRR2868004	Drought Stress (root)	13.982
SRR2967015	Control (root)	12.482

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.599
SRR9715740	Leaf	1.958
SRR9715741	Leaf	1.999
SRR9715739	Root	1.447
SRR9715742	Root	4.426
SRR9715743	Root	3.689

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.629
SRR8749028	MeJA induced 9h	0.144
SRR8749029	MeJA induced 9h	0.295
SRR8749030	Uninduced	0.221
SRR8749031	Uninduced	0.175
SRR8749032	Uninduced	0.041

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	14.530
SRR8400027	Control - Root	11.123