Gene detail information of Glyur003559s00047290 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31940.1 | 9.00E-11 | |
| NR | XP_003595823.1 | 6.66E-37 | hypothetical protein MTR_2g062220 [Medicago truncatula] |
| trEMBL | tr|A2Q3C9|A2Q3C9_MEDTR | 2.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:AFK39386.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03559 | 3372 | 3614 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.345 |
| SRR1783600 | control | 51.754 |
| SRR1783602 | moderate drought stress | 11.511 |
| SRR1811619 | moderate drought stress | 10.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.151 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.118 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.765 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.833 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.875 |
| SRR2868004 | Drought Stress (root) | 74.960 |
| SRR2967015 | Control (root) | 67.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.995 |
| SRR9715740 | Leaf | 5.784 |
| SRR9715741 | Leaf | 8.755 |
| SRR9715739 | Root | 18.085 |
| SRR9715742 | Root | 16.852 |
| SRR9715743 | Root | 11.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.755 |
| SRR8749028 | MeJA induced 9h | 8.622 |
| SRR8749029 | MeJA induced 9h | 3.568 |
| SRR8749030 | Uninduced | 0.415 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 129.785 |
| SRR8400027 | Control - Root | 80.651 |