Gene detail information of Glyur003558s00047551 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75890.2 | 8.00E-24 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| NR | KHN45938.1 | 6.60E-41 | GDSL esterase/lipase EXL3 [Glycine soja] |
| Swissprot | tr|Q94CH7|EXL2_ARATH | 1.00E-27 | GDSL esterase/lipase EXL2 (Precursor) |
| trEMBL | tr|K7KSL6|K7KSL6_SOYBN | 7.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G02530.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03558 | 16448 | 16816 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.750 |
| SRR1783600 | control | 0.805 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.434 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.067 |
| SRR2967015 | Control (root) | 0.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.749 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.246 |
| SRR9715739 | Root | 0.288 |
| SRR9715742 | Root | 1.517 |
| SRR9715743 | Root | 1.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.492 |
| SRR8400027 | Control - Root | 8.207 |