Gene detail information of Glyur003555s00041826 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42950.1 | 1.00E-39 | GYF domain-containing protein |
| NR | XP_006601315.1 | 3.69E-83 | PREDICTED: uncharacterized protein LOC100813188 isoform X2 [Glycine max] |
| trEMBL | tr|K7MNU8|K7MNU8_SOYBN | 1.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36840.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03555 | 21563 | 23334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.329 |
| SRR1783600 | control | 18.843 |
| SRR1783602 | moderate drought stress | 22.005 |
| SRR1811619 | moderate drought stress | 22.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.107 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.535 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.923 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.549 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.612 |
| SRR2868004 | Drought Stress (root) | 44.330 |
| SRR2967015 | Control (root) | 41.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.021 |
| SRR9715740 | Leaf | 41.486 |
| SRR9715741 | Leaf | 40.570 |
| SRR9715739 | Root | 5.876 |
| SRR9715742 | Root | 27.170 |
| SRR9715743 | Root | 25.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 79.306 |
| SRR8749028 | MeJA induced 9h | 36.565 |
| SRR8749029 | MeJA induced 9h | 63.329 |
| SRR8749030 | Uninduced | 54.469 |
| SRR8749031 | Uninduced | 61.541 |
| SRR8749032 | Uninduced | 72.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.044 |
| SRR8400027 | Control - Root | 36.861 |