Gene detail information of Glyur003555s00041825 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65650.1 | 5.00E-23 | Protein of unknown function (DUF1195) |
| NR | XP_004501128.1 | 8.81E-53 | PREDICTED: uncharacterized protein LOC101512645 [Cicer arietinum] |
| trEMBL | tr|A0A072VD96|A0A072VD96_MEDTR | 4.00E-53 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH36150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03555 | 19749 | 20902 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003555s00041825.1 | PF06708.6 | DUF1195 | 8 | 129 | 4.30E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.865 |
| SRR1783600 | control | 2.901 |
| SRR1783602 | moderate drought stress | 2.087 |
| SRR1811619 | moderate drought stress | 2.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.534 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.327 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.509 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.284 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.818 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.776 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.246 |
| SRR2868004 | Drought Stress (root) | 9.557 |
| SRR2967015 | Control (root) | 9.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.481 |
| SRR9715740 | Leaf | 0.563 |
| SRR9715741 | Leaf | 3.146 |
| SRR9715739 | Root | 3.125 |
| SRR9715742 | Root | 8.448 |
| SRR9715743 | Root | 6.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.676 |
| SRR8749028 | MeJA induced 9h | 18.033 |
| SRR8749029 | MeJA induced 9h | 8.801 |
| SRR8749030 | Uninduced | 3.599 |
| SRR8749031 | Uninduced | 0.607 |
| SRR8749032 | Uninduced | 2.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.353 |
| SRR8400027 | Control - Root | 7.470 |