Gene detail information of Glyur003531s00039534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26570.1 | 1.00E-159 | Plant protein of unknown function (DUF827) |
| NR | XP_003523602.1 | 0 | PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like isoform X1 [Glycine max] |
| Swissprot | tr|O48724|WEB1_ARATH | 0 | Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 |
| trEMBL | tr|K7KHY4|K7KHY4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G04100.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03531 | 3282 | 7174 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003531s00039534.1 | PF05701.6 | WEMBL | 222 | 731 | 2.30E-183 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.805 |
| SRR1783600 | control | 8.072 |
| SRR1783602 | moderate drought stress | 10.260 |
| SRR1811619 | moderate drought stress | 10.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.589 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.928 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.213 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.283 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.714 |
| SRR2868004 | Drought Stress (root) | 17.321 |
| SRR2967015 | Control (root) | 18.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.479 |
| SRR9715740 | Leaf | 6.050 |
| SRR9715741 | Leaf | 8.681 |
| SRR9715739 | Root | 0.733 |
| SRR9715742 | Root | 4.188 |
| SRR9715743 | Root | 4.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.252 |
| SRR8749028 | MeJA induced 9h | 31.236 |
| SRR8749029 | MeJA induced 9h | 29.155 |
| SRR8749030 | Uninduced | 42.401 |
| SRR8749031 | Uninduced | 110.669 |
| SRR8749032 | Uninduced | 66.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.428 |
| SRR8400027 | Control - Root | 12.263 |