Gene detail information of Glyur003514s00039550 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42070.1 | 4.00E-22 | |
| NR | KEH21249.1 | 2.40E-36 | hypothetical protein MTR_8g099615 [Medicago truncatula] |
| trEMBL | tr|A0A072TUP6|A0A072TUP6_MEDTR | 9.00E-37 | Uncharacterized protein {ECO:0000313|EMBL:KEH21249.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03514 | 22528 | 23418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.145 |
| SRR1783600 | control | 2.542 |
| SRR1783602 | moderate drought stress | 3.314 |
| SRR1811619 | moderate drought stress | 3.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.663 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.325 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.682 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.146 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.124 |
| SRR2868004 | Drought Stress (root) | 3.472 |
| SRR2967015 | Control (root) | 2.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.816 |
| SRR9715740 | Leaf | 9.138 |
| SRR9715741 | Leaf | 3.820 |
| SRR9715739 | Root | 3.043 |
| SRR9715742 | Root | 2.611 |
| SRR9715743 | Root | 1.261 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.773 |
| SRR8749028 | MeJA induced 9h | 4.085 |
| SRR8749029 | MeJA induced 9h | 4.588 |
| SRR8749030 | Uninduced | 1.093 |
| SRR8749031 | Uninduced | 0.239 |
| SRR8749032 | Uninduced | 0.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.161 |
| SRR8400027 | Control - Root | 4.289 |