Gene detail information of Glyur003514s00039547 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G14140.1 | 4.00E-15 | 2-oxoglutarate-dependent dioxygenase family protein |
| NR | XP_006573391.1 | 2.55E-38 | PREDICTED: uncharacterized protein LOC100818496 isoform X2 [Glycine max] |
| trEMBL | tr|K7K3K1|K7K3K1_SOYBN | 1.00E-38 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G32116.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03514 | 14163 | 18730 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.030 |
| SRR1811619 | moderate drought stress | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.659 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.546 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.631 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.220 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.774 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 88.924 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 89.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.093 |
| SRR2868004 | Drought Stress (root) | 24.629 |
| SRR2967015 | Control (root) | 35.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.602 |
| SRR9715740 | Leaf | 0.306 |
| SRR9715741 | Leaf | 11.407 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.079 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.877 |
| SRR8749028 | MeJA induced 9h | 12.513 |
| SRR8749029 | MeJA induced 9h | 17.325 |
| SRR8749030 | Uninduced | 4.030 |
| SRR8749031 | Uninduced | 13.355 |
| SRR8749032 | Uninduced | 8.352 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.054 |
| SRR8400027 | Control - Root | 0.068 |