Gene detail information of Glyur003496s00043377 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05680.1 | 1.00E-65 | embryo defective 2016 |
| NR | XP_006588873.1 | 2.77E-156 | PREDICTED: uncharacterized protein LOC100787719 [Glycine max] |
| trEMBL | tr|K7LI30|K7LI30_SOYBN | 1.00E-156 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G10154.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03496 | 16478 | 18284 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.312 |
| SRR1783600 | control | 4.231 |
| SRR1783602 | moderate drought stress | 4.289 |
| SRR1811619 | moderate drought stress | 4.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.245 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.038 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.171 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.025 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.460 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.172 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.212 |
| SRR2868004 | Drought Stress (root) | 15.632 |
| SRR2967015 | Control (root) | 15.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.396 |
| SRR9715740 | Leaf | 2.523 |
| SRR9715741 | Leaf | 1.998 |
| SRR9715739 | Root | 2.707 |
| SRR9715742 | Root | 16.576 |
| SRR9715743 | Root | 14.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.491 |
| SRR8749028 | MeJA induced 9h | 12.201 |
| SRR8749029 | MeJA induced 9h | 0.780 |
| SRR8749030 | Uninduced | 0.975 |
| SRR8749031 | Uninduced | 1.967 |
| SRR8749032 | Uninduced | 0.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.952 |
| SRR8400027 | Control - Root | 18.588 |