Gene detail information of Glyur003496s00043376 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05680.2 | 5.00E-37 | embryo defective 2016 |
| NR | KEH41878.1 | 2.38E-105 | embryo defective 2016 protein [Medicago truncatula] |
| trEMBL | tr|A0A072VKE9|A0A072VKE9_MEDTR | 9.00E-106 | Embryo defective 2016 protein {ECO:0000313|EMBL:KEH41878.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03496 | 8316 | 10446 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.190 |
| SRR1783600 | control | 3.333 |
| SRR1783602 | moderate drought stress | 3.869 |
| SRR1811619 | moderate drought stress | 3.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.167 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.258 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.128 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.547 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.716 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.585 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.999 |
| SRR2868004 | Drought Stress (root) | 14.184 |
| SRR2967015 | Control (root) | 16.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.246 |
| SRR9715740 | Leaf | 2.240 |
| SRR9715741 | Leaf | 4.198 |
| SRR9715739 | Root | 1.509 |
| SRR9715742 | Root | 15.411 |
| SRR9715743 | Root | 12.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.169 |
| SRR8749028 | MeJA induced 9h | 5.458 |
| SRR8749029 | MeJA induced 9h | 0.616 |
| SRR8749030 | Uninduced | 0.837 |
| SRR8749031 | Uninduced | 0.811 |
| SRR8749032 | Uninduced | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.995 |
| SRR8400027 | Control - Root | 16.361 |