Gene detail information of Glyur003480s00040674 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G55610.1 | 3.00E-87 | |
| NR | AFK39357.1 | 0 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SGG5|I3SGG5_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK39357.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03480 | 6655 | 11421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.150 |
| SRR1783600 | control | 8.234 |
| SRR1783602 | moderate drought stress | 7.064 |
| SRR1811619 | moderate drought stress | 6.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.601 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.566 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.192 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.002 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.819 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.455 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.663 |
| SRR2868004 | Drought Stress (root) | 38.036 |
| SRR2967015 | Control (root) | 36.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.234 |
| SRR9715740 | Leaf | 19.216 |
| SRR9715741 | Leaf | 26.109 |
| SRR9715739 | Root | 13.825 |
| SRR9715742 | Root | 14.297 |
| SRR9715743 | Root | 15.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.194 |
| SRR8749028 | MeJA induced 9h | 13.362 |
| SRR8749029 | MeJA induced 9h | 16.613 |
| SRR8749030 | Uninduced | 8.930 |
| SRR8749031 | Uninduced | 4.102 |
| SRR8749032 | Uninduced | 5.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 33.539 |
| SRR8400027 | Control - Root | 36.242 |