Gene detail

Gene detail information of Glyur003474s00034633

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67000.1	7.00E-113	Protein kinase superfamily protein
NR	XP_003524368.1	0	PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max]
COG	YP_001958461.1	2.00E-21	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	5.00E-132	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|I1K5M8\|I1K5M8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G34780.1}

Sequence

Transcript Sequence

>Glyur003474s00034633.1
ATGGATACTCATTTCCCCTTCCTCGCATCCATGCTCGCCCTGGTTTTCTTCTCAACAACTTTGCCACAATCCCACTCTCAAAAAAATGACAGTTACTCTACTTGCAGCAAATCATTCAGCTGTGGAACTCTCATCACAAACGTATCATATCCTTTCTGGGGAGGGAACCGACCCCAGTTTTGTGGCGGTCATGGGTTCAAGCTCACGTGCATGCATAACCAAAACACTTCGATTCAAGTTGGTTCACAAAAGTTCAATGTAATAAACATCAACCAAACGGCTTCTACCATGAGAGTTGTGAGAACAGACCTTGTCTATGATAGCTGCTCTTCCAATTTCACCAACACTTCTCTGAGTGGAAGCCCCTTTAGCTTTCTTCCAACCGTTCAGAATGTCACTATATTCTACGAATGCCCCTCTTGGGGTTCAATTGTGGGAAATAGTACTTTTACGTGCAGGAACGATAGCAATAAACATGCTTTCTATGTGGTTAATGGAACAGAACAGGTNCAGCAGTTTTCTGCAGGCCTTCAGAACTGCGGGGTTAGGATTCAAGTGCAAGTCTCCAAGGGTGTTGTTTGGGACGCTGAGAGTGGAGTTGATACGCTGAAGAAAGCGCTGGATCAAGGATTTGATGTGAAGTATGATGCAGGGTGGTCTTCTCAGTGCAGTGTGTGCAGGGATTCTGGAGGAACATGTGGAACGAATGAGAAACAGAATGGTTCTGCTCATTTTTCCTGTTATTGCCCCGGTGGAACTCATGATGCAGCGTGTCCTACTCACAAAAGTCGAACGAAGCACAAAGTGTTGAAGCTGGTTTTAGGTTTCTTAGCTTGTGGANTTGGACTACCTCTTATCGCTGTCATCATATGCCGTAATAAAGAGAAGATGTGGAAGATTATAAAAACACAATTTGGCAAGATAACAAGGAGTGATCGAGATATAGAAGCCTTTCTTGAAAGTCAAGGCACTTTGGGNATAAAAAGATATAGTTTCCCTGATATCAAGAAAATGACCGACTCCTTCAAAGTTAAACTGGGAGAAGGTGGTTATGGTTCTGTATACAAAGGGAAATTGCCCAATAGTAATTGCTATGTGGCTGTGAAGTTACTGAATGAGTCAAAAGGGAGTGGTGGTGGAGAAGAATTCATCAATGAGGTAGCCAGCATAAGCAAAACATCCCATGTCAATGTNGTCACTCTTCTTGGGTTTTGCCTTGANGGTAGNAGAAAAGCTCTCATCTANGAGTTCNTGCCCAATGGCTCCCTTGAAAAGTANATTCACAACAAANTTGTATCTAAAAGTAAAACTAGTACTCCATCCTTGAGTTGGGAGAAANTGTACGAAATTGCAATAGGGATAGCTCGAGGGCTTGAGTACTTGCACAAAGGGTGCAACACTAGGATTTTGCATTTCGACATTAAACCACACAACATCCTTTTGGATGAAACTTATCGCCCGAAGATATCGGATTTCGGGCTTGCAAAGCTCAACACAAGGGACGAGAGCATTGTTTCAATGTCAAATGCTAGAGGGACAATTGGGTATGTAGCTCCCGAAATGTGCAACNAAAGTTTTGGAGGTGTTTCCCATAAGTCTGACGTCTATAGCTATGGAATGATGCTGCTAGAAATGGTTGGAGGAGGGAAGAAGAACAACAACTTGGAAGCAAGTCGCTCAAGNGAGATATATTTTCCGCATTTGGTGATTTATAAGAAGCTTGAGCTCGGCAGTGATTTGGGACTCGATGGGGTGGTGTCCACANAGGAAAATGAGATAGCCAAGAAATTGACTATGGTGGGTTTGTGGTGCATTCAGACAATTCCTTCTCATAGACCTACAATAAGTAGAGTGATTGACATGTTGGAAGGTAGCATGGATTCCTTGGAAATGCCACCAAAACCTGTTGTGCATTCTCCTCCGAGATCAATATCAGAATTTTCCTCCTCTGCATCAGAATCACTGAGCACTGAGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03474	2996	6824	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003474s00034633.1	PF14380.1	WAK_assoc	151	252	8.20E-15
Glyur003474s00034633.1	PF07714.12	Pkinase_Tyr	342	622	1.60E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.042
SRR1783600	control	0.038
SRR1783602	moderate drought stress	0.109
SRR1811619	moderate drought stress	0.111

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.268
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.250

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.608
SRR2868004	Drought Stress (root)	10.207
SRR2967015	Control (root)	6.337

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	49.624
SRR9715740	Leaf	10.035
SRR9715741	Leaf	43.342
SRR9715739	Root	0.347
SRR9715742	Root	0.292
SRR9715743	Root	0.433

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.435
SRR8749028	MeJA induced 9h	3.443
SRR8749029	MeJA induced 9h	2.272
SRR8749030	Uninduced	10.250
SRR8749031	Uninduced	8.429
SRR8749032	Uninduced	5.869

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.544
SRR8400027	Control - Root	3.278