Gene detail information of Glyur003473s00042319 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004510225.1 | 3.09E-93 | PREDICTED: TMV resistance protein N-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7LF39|G7LF39_MEDTR | 1.00E-90 | Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:AET01397.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03473 | 136 | 771 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.936 |
| SRR1783600 | control | 5.670 |
| SRR1783602 | moderate drought stress | 7.293 |
| SRR1811619 | moderate drought stress | 6.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.925 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.599 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.090 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.286 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.578 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.245 |
| SRR2868004 | Drought Stress (root) | 7.794 |
| SRR2967015 | Control (root) | 13.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.684 |
| SRR9715740 | Leaf | 27.710 |
| SRR9715741 | Leaf | 48.708 |
| SRR9715739 | Root | 0.986 |
| SRR9715742 | Root | 9.394 |
| SRR9715743 | Root | 7.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.028 |
| SRR8749028 | MeJA induced 9h | 10.829 |
| SRR8749029 | MeJA induced 9h | 13.663 |
| SRR8749030 | Uninduced | 25.615 |
| SRR8749031 | Uninduced | 11.094 |
| SRR8749032 | Uninduced | 14.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.846 |
| SRR8400027 | Control - Root | 17.020 |