Gene detail information of Glyur003455s00042205 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04170.1 | 4.00E-08 | eukaryotic translation initiation factor 2 gamma subunit |
| NR | EWM27044.1 | 9.48E-08 | eukaryotic translation initiation factor 2 subunit 3 [Nannochloropsis gaditana] |
| trEMBL | tr|W7U2Z3|W7U2Z3_9STRA | 4.00E-08 | Eukaryotic translation initiation factor 2 subunit 3 {ECO:0000313|EMBL:EWM27044.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03455 | 12236 | 17023 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.936 |
| SRR1783600 | control | 2.077 |
| SRR1783602 | moderate drought stress | 4.437 |
| SRR1811619 | moderate drought stress | 4.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.143 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.991 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.274 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.802 |
| SRR2868004 | Drought Stress (root) | 1.096 |
| SRR2967015 | Control (root) | 1.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.912 |
| SRR9715740 | Leaf | 1.334 |
| SRR9715741 | Leaf | 0.866 |
| SRR9715739 | Root | 0.400 |
| SRR9715742 | Root | 0.453 |
| SRR9715743 | Root | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.470 |
| SRR8749028 | MeJA induced 9h | 4.870 |
| SRR8749029 | MeJA induced 9h | 4.962 |
| SRR8749030 | Uninduced | 1.825 |
| SRR8749031 | Uninduced | 1.351 |
| SRR8749032 | Uninduced | 1.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.608 |
| SRR8400027 | Control - Root | 5.937 |