Gene detail information of Glyur003454s00042037 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004503086.1 | 5.15E-36 | PREDICTED: uncharacterized protein DDB_G0271670-like [Cicer arietinum] |
| trEMBL | tr|I1MBQ1|I1MBQ1_SOYBN | 1.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G38980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03454 | 7697 | 8631 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.027 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 1.891 |
| SRR1811619 | moderate drought stress | 1.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.934 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.745 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 147.049 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 149.452 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.283 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.011 |
| SRR2868004 | Drought Stress (root) | 2.044 |
| SRR2967015 | Control (root) | 5.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.016 |
| SRR9715740 | Leaf | 0.290 |
| SRR9715741 | Leaf | 1.560 |
| SRR9715739 | Root | 0.074 |
| SRR9715742 | Root | 0.854 |
| SRR9715743 | Root | 0.662 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.878 |
| SRR8749028 | MeJA induced 9h | 20.635 |
| SRR8749029 | MeJA induced 9h | 8.152 |
| SRR8749030 | Uninduced | 23.137 |
| SRR8749031 | Uninduced | 66.526 |
| SRR8749032 | Uninduced | 70.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.715 |
| SRR8400027 | Control - Root | 1.703 |