Gene detail information of Glyur003445s00041469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53160.2 | 3.00E-83 | regulatory components of ABA receptor 3 |
| NR | XP_003602205.1 | 7.70E-122 | Abscisic acid receptor PYL8 [Medicago truncatula] |
| COG | YP_005438895.1 | 4.00E-08 | MxaD/XoxI protein, putative [Rubrivivax gelatinosus IL144] |
| Swissprot | tr|Q9FGM1|PYL8_ARATH | 9.00E-105 | Abscisic acid receptor PYL8 |
| trEMBL | tr|G7J6S4|G7J6S4_MEDTR | 3.00E-122 | Uncharacterized protein {ECO:0000313|EMBL:AFK47693.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03445 | 11516 | 16304 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003445s00041469.1 | PF10604.4 | Polyketide_cyc2 | 31 | 172 | 2.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.748 |
| SRR1783600 | control | 16.679 |
| SRR1783602 | moderate drought stress | 19.783 |
| SRR1811619 | moderate drought stress | 19.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.468 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.596 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 145.317 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 141.551 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 68.728 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 68.496 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.215 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.368 |
| SRR2868004 | Drought Stress (root) | 45.285 |
| SRR2967015 | Control (root) | 45.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.930 |
| SRR9715740 | Leaf | 47.042 |
| SRR9715741 | Leaf | 56.362 |
| SRR9715739 | Root | 26.303 |
| SRR9715742 | Root | 25.201 |
| SRR9715743 | Root | 29.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 60.735 |
| SRR8749028 | MeJA induced 9h | 68.343 |
| SRR8749029 | MeJA induced 9h | 86.999 |
| SRR8749030 | Uninduced | 45.774 |
| SRR8749031 | Uninduced | 84.220 |
| SRR8749032 | Uninduced | 80.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.925 |
| SRR8400027 | Control - Root | 43.554 |