Gene detail information of Glyur003440s00037457 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31950.1 | 1.00E-49 | cytochrome P450, family 82, subfamily C, polypeptide 3 |
| NR | KEH30996.1 | 2.15E-117 | cytochrome P450 family protein [Medicago truncatula] |
| COG | YP_004303682.1 | 3.00E-26 | cytochrome P450 [Polymorphum gilvum SL003B-26A1] |
| Swissprot | tr|O49858|C82A3_SOYBN | 1.00E-77 | Cytochrome P450 82A3 |
| trEMBL | tr|A0A072UNP8|A0A072UNP8_MEDTR | 8.00E-118 | Cytochrome P450 family protein {ECO:0000313|EMBL:KEH30996.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03440 | 23237 | 23845 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP82C3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003440s00037457.1 | PF00067.17 | p450 | 1 | 180 | 1.40E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.126 |
| SRR1783600 | control | 1.153 |
| SRR1783602 | moderate drought stress | 2.016 |
| SRR1811619 | moderate drought stress | 2.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.807 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 100.921 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 97.534 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.777 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.192 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.283 |
| SRR2868004 | Drought Stress (root) | 7.319 |
| SRR2967015 | Control (root) | 15.789 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.088 |
| SRR9715740 | Leaf | 9.567 |
| SRR9715741 | Leaf | 9.888 |
| SRR9715739 | Root | 0.728 |
| SRR9715742 | Root | 1.147 |
| SRR9715743 | Root | 0.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 65.456 |
| SRR8749028 | MeJA induced 9h | 94.847 |
| SRR8749029 | MeJA induced 9h | 131.922 |
| SRR8749030 | Uninduced | 196.159 |
| SRR8749031 | Uninduced | 106.512 |
| SRR8749032 | Uninduced | 162.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.719 |
| SRR8400027 | Control - Root | 3.032 |