Gene detail information of Glyur003430s00042371 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003609086.1 | 2.14E-25 | WD-40 repeat protein [Medicago truncatula] |
| trEMBL | tr|G7JRY6|G7JRY6_MEDTR | 8.00E-26 | Transducin/WD-40 repeat protein {ECO:0000313|EMBL:AES91283.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03430 | 5473 | 6665 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.560 |
| SRR1783600 | control | 2.062 |
| SRR1783602 | moderate drought stress | 2.078 |
| SRR1811619 | moderate drought stress | 1.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.427 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.148 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.871 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.375 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.969 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.671 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.742 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.048 |
| SRR2868004 | Drought Stress (root) | 14.347 |
| SRR2967015 | Control (root) | 10.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.108 |
| SRR9715740 | Leaf | 1.243 |
| SRR9715741 | Leaf | 1.110 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.379 |
| SRR9715743 | Root | 1.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 75.512 |
| SRR8749028 | MeJA induced 9h | 24.204 |
| SRR8749029 | MeJA induced 9h | 61.047 |
| SRR8749030 | Uninduced | 12.566 |
| SRR8749031 | Uninduced | 11.262 |
| SRR8749032 | Uninduced | 15.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.686 |
| SRR8400027 | Control - Root | 0.669 |