Gene detail information of Glyur003416s00046715 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51670.1 | 4.00E-13 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein |
| NR | XP_003516408.1 | 3.13E-15 | PREDICTED: patellin-6-like [Glycine max] |
| Swissprot | tr|Q9SCU1|PATL6_ARATH | 1.00E-15 | Patellin-6 |
| trEMBL | tr|I1J7J8|I1J7J8_SOYBN | 1.00E-15 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G31840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03416 | 20336 | 21223 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.931 |
| SRR1783600 | control | 2.092 |
| SRR1783602 | moderate drought stress | 2.476 |
| SRR1811619 | moderate drought stress | 1.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.626 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.807 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.983 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.173 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.757 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.671 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.277 |
| SRR2868004 | Drought Stress (root) | 3.679 |
| SRR2967015 | Control (root) | 3.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.676 |
| SRR9715740 | Leaf | 0.751 |
| SRR9715741 | Leaf | 1.463 |
| SRR9715739 | Root | 1.232 |
| SRR9715742 | Root | 1.587 |
| SRR9715743 | Root | 1.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.484 |
| SRR8749028 | MeJA induced 9h | 2.517 |
| SRR8749029 | MeJA induced 9h | 2.373 |
| SRR8749030 | Uninduced | 2.827 |
| SRR8749031 | Uninduced | 2.085 |
| SRR8749032 | Uninduced | 1.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.652 |
| SRR8400027 | Control - Root | 6.077 |