Gene detail information of Glyur003414s00042432 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25470.1 | 8.00E-12 | C-repeat/DRE binding factor 2 |
| NR | AAV66464.1 | 3.74E-33 | drought responsive element binding protein [Glycine soja] |
| Swissprot | tr|Q9SYS6|DRE1C_ARATH | 2.00E-18 | Dehydration-responsive element-binding protein 1C |
| trEMBL | tr|Q5RM57|Q5RM57_GLYSO | 1.00E-33 | Drought responsive element binding protein {ECO:0000313|EMBL:AAV66464.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03414 | 22637 | 25110 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.363 |
| SRR1783600 | control | 0.132 |
| SRR1783602 | moderate drought stress | 5.001 |
| SRR1811619 | moderate drought stress | 4.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.496 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 168.774 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 158.550 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.887 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.399 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.313 |
| SRR2868004 | Drought Stress (root) | 0.504 |
| SRR2967015 | Control (root) | 5.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.026 |
| SRR9715739 | Root | 0.547 |
| SRR9715742 | Root | 1.081 |
| SRR9715743 | Root | 1.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.006 |
| SRR8749028 | MeJA induced 9h | 0.621 |
| SRR8749029 | MeJA induced 9h | 0.062 |
| SRR8749030 | Uninduced | 0.094 |
| SRR8749031 | Uninduced | 0.037 |
| SRR8749032 | Uninduced | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.472 |
| SRR8400027 | Control - Root | 1.161 |