Gene detail information of Glyur003407s00043766 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19140.1 | 5.00E-25 | Aluminium induced protein with YGL and LRDR motifs |
| NR | AFK44925.1 | 5.04E-35 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SXD3|I3SXD3_LOTJA | 2.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:AFK44925.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03407 | 22143 | 22349 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003407s00043766.1 | PF12481.3 | DUF3700 | 2 | 68 | 9.90E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 585.618 |
| SRR1783600 | control | 591.920 |
| SRR1783602 | moderate drought stress | 750.457 |
| SRR1811619 | moderate drought stress | 751.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 603.083 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 604.946 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 483.632 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 473.787 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3543.167 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3579.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 90.628 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 92.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 205.730 |
| SRR2868004 | Drought Stress (root) | 436.516 |
| SRR2967015 | Control (root) | 593.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 264.490 |
| SRR9715740 | Leaf | 270.202 |
| SRR9715741 | Leaf | 554.772 |
| SRR9715739 | Root | 670.571 |
| SRR9715742 | Root | 532.085 |
| SRR9715743 | Root | 506.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 796.919 |
| SRR8749028 | MeJA induced 9h | 1996.413 |
| SRR8749029 | MeJA induced 9h | 1416.025 |
| SRR8749030 | Uninduced | 557.677 |
| SRR8749031 | Uninduced | 318.911 |
| SRR8749032 | Uninduced | 674.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 535.933 |
| SRR8400027 | Control - Root | 572.454 |