Gene detail information of Glyur003405s00042631 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G02880.1 | 5.00E-81 | mucin-related |
| NR | XP_003517783.1 | 1.89E-174 | PREDICTED: uncharacterized protein LOC100806758 isoform X1 [Glycine max] |
| trEMBL | tr|K7K1S8|K7K1S8_SOYBN | 7.00E-175 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G05360.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03405 | 11074 | 13844 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.680 |
| SRR1783600 | control | 7.537 |
| SRR1783602 | moderate drought stress | 7.623 |
| SRR1811619 | moderate drought stress | 7.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.395 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.359 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.594 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.438 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.636 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.482 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.419 |
| SRR2868004 | Drought Stress (root) | 12.131 |
| SRR2967015 | Control (root) | 11.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.106 |
| SRR9715740 | Leaf | 10.539 |
| SRR9715741 | Leaf | 9.081 |
| SRR9715739 | Root | 3.089 |
| SRR9715742 | Root | 7.268 |
| SRR9715743 | Root | 6.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.065 |
| SRR8749028 | MeJA induced 9h | 34.363 |
| SRR8749029 | MeJA induced 9h | 31.185 |
| SRR8749030 | Uninduced | 13.195 |
| SRR8749031 | Uninduced | 22.979 |
| SRR8749032 | Uninduced | 16.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.246 |
| SRR8400027 | Control - Root | 13.674 |