Gene detail

Gene detail information of Glyur003385s00046731

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G27520.1	4.00E-39	early nodulin-like protein 2
NR	XP_004510033.1	2.37E-76	PREDICTED: early nodulin-like protein 2-like [Cicer arietinum]
Swissprot	tr\|Q9T076\|ENL2_ARATH	1.00E-50	Early nodulin-like protein 2 (Precursor)
trEMBL	tr\|A0A072TQN9\|A0A072TQN9_MEDTR	3.00E-69	Plastocyanin-like domain protein {ECO:0000313\|EMBL:KEH19526.1}

Sequence

Transcript Sequence

>Glyur003385s00046731.1
GTGCTGGTCCACTACGATGATGCCCACCCAAAATTATTCCAAAAGAAAATTAAATAGGTTTCCATCTATACCAAAATTGCATCTCCACAATTTCGCCAAGTGTGTGGTTTTCATTTTTTCAAAGGATGAATTACACAATCAATGCAAATAATCNTCACACGTTACACTCTCGCATTTGACACCTTGTTGTGTCTCATCTCCTTCATTGGAATAGTCCACCTATCCACATATACAAGAGTGAGATATCTTCTTAGTTTCCCTTTATAGTTCAATGATCCTTTCATCATCACAAGTTTCCCATTACCTTCACAACCATATATCAAACACACACCCTCTACATCTATAGCTTCCCATAATTATTAATTTCCTCATGGAGTTTCAGAGACCTCTATGCCTCTTCTTTGTTCTCTTCACACTTCTCTCAATCTCCCAAGCACACAAATTCTACGTTGGGGGAAGCGATGGATGGGTTCCAAACCCTTCCGAGAGTTATAACCAATGGGCTGGAAGGAAAAGGTTCCAAATCAACGACACTATAGTGTTTAAGTACAGGAAGGGTTCAGACTCGGTGTTGGAAGTGAAGAAAGAGGACTATGACCAGTGCAACAAGACGAACCCGATGAAGAAGTTCGAGGAGGGTGATACGGAGTTCACGTTTGATCGATCAGGACCATTCTACTTCATCAGTGGGAAAGATGGGAACTGCGAAAAGGGTCAAAAGTTACTTGTTGTGGTCTTGTCCNCGCGGAAACAAACACAAACACCACCACCAAAACCAACACCCTCTGTTCCAAGTCCTACTATATCGCCACCAAAACCTTCTTCACCTTCGCCGTCACCTAGTGGTGGTGGTGGTGGCGGCATGTCACCGGTTTCACCGTCGCCAAACCCAATTCCACCGTCTGGATCGTCGCCACCGGCGATGATGCCGCCAACCCCCTCCGTTTCACCTTCTCCGGCGAGTTCCCCTGTTCCGGCTGGTGCACCTCCAGCTCCTGCAGCCACATCACCATCTCCGTCTCCGATGGGCACCTCTCCGGCTCCATCGCCGGCGATGCCGGGGGCTACACCACCGTCTCCTTCTCCGATGGGCACCTCTCCGGCTCCAACTCCGATGGGCACCTCTCCAGCTCCATCACCGGGGATGCCGGGGGCTACACCACCGTCTCCGTCTCCGATGGGCACCTCN

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03385	6004	7287	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0009055 electron carrier activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003385s00046731.1	PF02298.12	Cu_bind_like	34	116	2.20E-24

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.121
SRR1783600	control	11.784
SRR1783602	moderate drought stress	9.562
SRR1811619	moderate drought stress	9.619

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.652
DRR006520	Root Summer glycyrrhizin high producing strain	10.639
DRR006521	Root Winter glycyrrhizin high producing strain	29.340
DRR006522	Root Winter glycyrrhizin high producing strain	29.461
DRR006523	Root Summer glycyrrhizin low producing strain	20.377
DRR006524	Root Summer glycyrrhizin low producing strain	20.924
DRR006525	Leaf Summer glycyrrhizin high producing strain	248.441
DRR006526	Leaf Summer glycyrrhizin high producing strain	248.958

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.911
SRR2868004	Drought Stress (root)	39.927
SRR2967015	Control (root)	15.903

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	314.124
SRR9715740	Leaf	266.311
SRR9715741	Leaf	302.249
SRR9715739	Root	17.226
SRR9715742	Root	45.085
SRR9715743	Root	34.924

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.718
SRR8749028	MeJA induced 9h	7.917
SRR8749029	MeJA induced 9h	1.094
SRR8749030	Uninduced	2.450
SRR8749031	Uninduced	0.387
SRR8749032	Uninduced	0.626

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.135
SRR8400027	Control - Root	14.837