Gene detail information of Glyur003370s00040921.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54500.1 | 9.00E-06 | flavodoxin-like quinone reductase 1 |
| NR | KHN06047.1 | 1.32E-07 | Flavoprotein wrbA [Glycine soja] |
| Swissprot | tr|Q9LSQ5|FQR1_ARATH | 2.00E-06 | NAD(P)H dehydrogenase (quinone) FQR1 {ECO:0000305} |
| trEMBL | tr|I1LT63|I1LT63_SOYBN | 3.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G25950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03370 | 7168 | 9661 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03809 | wrbA | EC:1.6.5.2 | Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
| Ubiquinone and other terpenoid-quinone biosynthesis | map00130 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.408 |
| SRR1783600 | control | 0.494 |
| SRR1783602 | moderate drought stress | 1.617 |
| SRR1811619 | moderate drought stress | 1.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.235 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.176 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.783 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.476 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.144 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.072 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.347 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.296 |
| SRR2868004 | Drought Stress (root) | 1.358 |
| SRR2967015 | Control (root) | 1.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.971 |
| SRR9715740 | Leaf | 2.055 |
| SRR9715741 | Leaf | 2.761 |
| SRR9715739 | Root | 0.443 |
| SRR9715742 | Root | 0.574 |
| SRR9715743 | Root | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.540 |
| SRR8749028 | MeJA induced 9h | 1.062 |
| SRR8749029 | MeJA induced 9h | 0.502 |
| SRR8749030 | Uninduced | 0.330 |
| SRR8749031 | Uninduced | 0.331 |
| SRR8749032 | Uninduced | 0.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.797 |
| SRR8400027 | Control - Root | 2.709 |