Gene detail information of Glyur003366s00038527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41610.1 | 2.00E-64 | |
| NR | KHN29589.1 | 3.13E-177 | hypothetical protein glysoja_005313 [Glycine soja] |
| trEMBL | tr|I1L796|I1L796_SOYBN | 4.00E-177 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G42070.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03366 | 4002 | 4985 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.857 |
| SRR1783600 | control | 5.879 |
| SRR1783602 | moderate drought stress | 4.914 |
| SRR1811619 | moderate drought stress | 4.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.203 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.910 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.142 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.960 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.447 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.890 |
| SRR2868004 | Drought Stress (root) | 11.323 |
| SRR2967015 | Control (root) | 7.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.228 |
| SRR9715740 | Leaf | 1.288 |
| SRR9715741 | Leaf | 0.459 |
| SRR9715739 | Root | 0.733 |
| SRR9715742 | Root | 8.074 |
| SRR9715743 | Root | 7.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.714 |
| SRR8400027 | Control - Root | 21.439 |