Gene detail

Gene detail information of Glyur003364s00042091

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14470.1	1.00E-149	NB-ARC domain-containing disease resistance protein
NR	XP_004491239.1	0	PREDICTED: putative disease resistance protein At3g14460-like isoform X2 [Cicer arietinum]
COG	YP_001660791.1	5.00E-15	apoptotic protease-activating factor 1 like [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q9LRR4\|R13L1_ARATH	7.00E-177	Putative disease resistance RPP13-like protein 1
trEMBL	tr\|V5TGI0\|V5TGI0_CICAR	0	NBS-LRR protein {ECO:0000313\|EMBL:AHB64354.1}

Sequence

Transcript Sequence

>Glyur003364s00042091.1
ATGGTCAATAAGTTGGAAGACATAGTTGGAAGACTTGAATCCATTTTCAAGCTCAAAGATATTCTTGGTCTTAAAGAGATTGCGAGGGAGAACTACTCATCATGGAGGACTCCTTCAACGTCTCTNGAAGACGACGGATCTAATATGTATGGTAGGGATGAAGACAAAAAGGCCATACTCAAATTGTTGTTAGAAGATGATAAGGGTGATGGTAAAGTATGTGTGATCCCCATAGTTGGTATGGGTGGGGTTGGAAAAACCACGTTAGCCCAATCGGTGTACAACGATGACAGTGTGAAGCGGAAATTTGATTCTCAAGCATGGGCTTGTGTTTCTGATGAATTTGATGTCTTGAAGGTTACAAAGACTCTCTTAGAGGCGGTTACGAGAACTGCTTGTAGCACAACTGACATAAATTCGCTTCATCTTGATTTGAAGGAGAAGTTGATGGGAAAGAAGTTCCTAATTGTTTTGGATGACGTTTGGACCGAGGATTATGTTGGTTGGAATTTTCTCATGAGGCCTCTTCGATGNGGAGCTGAGGGAAGTAAAATTCTTGTAACAACCNGTAGTGAGAAAGTTGCCTCTATGGTCAAGACTTTTGAAGGTTACTACCCTCTTAAACAATTGTCAGATGAAGATTGTTTGTCAGTATTTGCAAGCCACGCACGCCTTTCAGCAGAATCNGGTGATAGTACGGATCTCAAAATAATTGGCAGAGAGATTGTTAGAAAATGTAAGGGATTGCCTTTAGCAGCACAATCGCTCGGGGGCTTATTGCGAGGAAAGCATGATATGAGGGACTGGAATAATGTACTAAATAGTAATATTTGGGAAATTTCTGAAAAAGAGAGTAAGATCATTCCAGCACTGAGAATCAGTTACCATTATCTCCCTCCATATGTGAAACNCTGTTTTGTTTATTGTTCACTGTATCCTAAGGACTACGAAGTTGATAGAGATGAATTGATCANGTTGTGGATGGCAGAAGATCTTTTACAGCCTCCGAGCAATGGAAGGACTTTAGAAGAAGTTGGTTATGAGTATTTTAATGATTTAGCTTCAATATCATTTTTTCAACGTTCCGGAAGTGGTAGCAAGGATTTTGTGATGCATGATCTCGTGCACGATTTAGCAACATCAATTGGTGGAGAATTCTATTGTAGAACAGAAGTACTCGGAAAAGAAACCAAGGTTGGTATCAAGACTCGTCATTTGTCATTTAGCAAATTCAGTGATTTTGTATCAGAAAATTGTGAAATTTTGGGCAGAGCAAAATCTCTAAGGACATTTTTGCCAATCAAATTACAATATGATCCATTCAACAACAAAAAGGCGTCATTTGCCTTTTCATTGAACTTGAAGTGCCTGAGAGTTATGTCATTTNGCAATTTTCCTGATTTTGATGCATTGCCAGATTCAGTTGGTGAATTGATCCATTTGCGTTATTTGGATCTCTCGTGTACAAGTATAGAGACATTACCAGAGTCATTGTGTAACTTGTATAATCTACAGACGTTGAAGTTGGCATGTTGTCAAAACCTGACTATGCTGCCCAATGACATGCAAAATCTNGTAAATTTGNGCCATCTTGATATTAGTGAAACTTTTAATTTNAAGGAAATGCCTAGAGAAATGNGCAAATTAAATCATTTGCAACATTTGAGTTGGTTTATTGTAGGCAAGCATGAAGAGAAGAAGGGGATCAAGCAACTCGGAACACTTTCAAATCTTCAAGGATCACTTTCAATAACAAAATTAGAGAATGTTACCAATAGCTTTGAAGCATTGGANGCAAGGATAGTGGATAAGAAGCANCTTGANGNGTTAANCTTGGNCTGGTCTTNAGGGAATGATTNTTNCGATTCCCAAAGTGAAATGGATATACTCGACAANTTACAGNNTCCCCAGAACCTGAAAANGCTAACTATATNANGATACAGAGGCACGAGATTTCCANAATGGGTTGGACATCCTTCCTACCACAATATGATTCGGCTATCTCTATCTTCTTGTCAGAATTGTTGTATCCTTCCATGTCTTGGACAATTACACTCTCTCCAGTACTTGACTATCGATGGATTGAATATGCTGCAGGCTATTGGATCTGAATTTTTGACGAATGGTGATTCTTTTTCAGGGACACCCTTTCCCTCCCTTGTATTGTTGCAGTTTGATGAAATGTCATGTTGGGAGGTGTGGAATCATCCCCTTGAGTTAGGTGCTTTTCCTGTACTAAAGTTCCTTGTGATACGTGGTTGTCCCAGATTACTGGGAGATTTGCCAGCTCATCTTCCTGCTCTAGAAACAATTTGTATTGTATGGTGCGACCAACTTGCTTCTTCTCTCCCAAGGGCTCCTTCCATCCGCGAGTTAGTGATAATTACTAGCAGTAAAGTATCCTTACCATCAGAGCTACCGCTCTCTATGGAAAAGATATCTATTCAAGGAAGACAGGTGACAGAGCTCATACCTGAAGACATCGTTGTCACCCTACCAACTTCTCTTCGAACTTTGAAAATAAGAGATTGTTCGTCTGCCATATCATTTCCGGGAGATTGTTTACCCGCATCCTTGAAGGATTTGTGTATTGTAGATTGTAGAAAACTAGATCTCCCAAAGCAAAACCACCAGCACAAGTCACTTCAGTCATTGCGCATAGAAAACAGTTGTGATTCTCTCATGACCCTCCCACTGGAGATGCTTCCGAATCTCTATCATGTCAACATCAAAAACTGTGAAAATCTAGAATCTCTTTCGGGGTCAAAGATTCTTCAAAGTCTCAATTATTTTTCCATTGCGGACTGCCCCAATTTTGTATCGTTCCCAAGAGAAGGATTGTCCGCACCTAACTTGACATCATTCTGTGTCTCCAACTGTGTTAGTTTAAGTTTGTTGTGCAAGGTCATATGAGCGCTCCATTAGTTGAACCGGATAGTCAAAGCAAATTTTTATTTAACATTTTAATTTAAGGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03364	8508	12233	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003364s00042091.1	PF00931.17	NB-ARC	53	335	5.10E-71
Glyur003364s00042091.1	PF13855.1	LRR_8	480	534	4.70E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.083
SRR1783600	control	3.852
SRR1783602	moderate drought stress	4.633
SRR1811619	moderate drought stress	4.467

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.668
DRR006520	Root Summer glycyrrhizin high producing strain	0.649
DRR006521	Root Winter glycyrrhizin high producing strain	2.191
DRR006522	Root Winter glycyrrhizin high producing strain	2.218
DRR006523	Root Summer glycyrrhizin low producing strain	0.912
DRR006524	Root Summer glycyrrhizin low producing strain	1.109
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.078
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.062

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.922
SRR2868004	Drought Stress (root)	11.714
SRR2967015	Control (root)	8.279

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.383
SRR9715740	Leaf	0.125
SRR9715741	Leaf	3.071
SRR9715739	Root	0.840
SRR9715742	Root	6.012
SRR9715743	Root	4.337

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.746
SRR8749028	MeJA induced 9h	1.869
SRR8749029	MeJA induced 9h	0.948
SRR8749030	Uninduced	0.693
SRR8749031	Uninduced	1.097
SRR8749032	Uninduced	0.390

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.664
SRR8400027	Control - Root	6.846