Gene detail information of Glyur003337s00045979 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12830.1 | 7.00E-38 | SAUR-like auxin-responsive protein family |
| NR | XP_003546804.1 | 3.56E-72 | PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Glycine max] |
| Swissprot | tr|P33082|AXX15_SOYBN | 1.00E-12 | Auxin-induced protein X15 |
| trEMBL | tr|I1MJA2|I1MJA2_SOYBN | 1.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G41130.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03337 | 8906 | 9316 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003337s00045979.1 | PF02519.9 | Auxin_inducible | 31 | 115 | 5.90E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.839 |
| SRR1783600 | control | 9.156 |
| SRR1783602 | moderate drought stress | 12.039 |
| SRR1811619 | moderate drought stress | 11.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.717 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.594 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.651 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.580 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.442 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.293 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.077 |
| SRR2868004 | Drought Stress (root) | 35.116 |
| SRR2967015 | Control (root) | 61.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.711 |
| SRR9715740 | Leaf | 12.548 |
| SRR9715741 | Leaf | 16.078 |
| SRR9715739 | Root | 24.767 |
| SRR9715742 | Root | 14.994 |
| SRR9715743 | Root | 17.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.141 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 69.269 |
| SRR8400027 | Control - Root | 28.763 |