Gene detail information of Glyur003332s00035254 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12560.1 | 6.00E-107 | TRF-like 9 |
| NR | XP_004503150.1 | 0 | PREDICTED: telomere repeat-binding protein 4-like [Cicer arietinum] |
| Swissprot | tr|Q9C7B1|TRP3_ARATH | 4.00E-151 | Telomere repeat-binding protein 3 |
| trEMBL | tr|I1LMF8|I1LMF8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34050.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03332 | 1398 | 6164 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.269 |
| SRR1783600 | control | 4.210 |
| SRR1783602 | moderate drought stress | 4.967 |
| SRR1811619 | moderate drought stress | 5.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.101 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.808 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.319 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.882 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.732 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.463 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.381 |
| SRR2868004 | Drought Stress (root) | 62.118 |
| SRR2967015 | Control (root) | 52.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 54.714 |
| SRR9715740 | Leaf | 42.893 |
| SRR9715741 | Leaf | 67.101 |
| SRR9715739 | Root | 3.290 |
| SRR9715742 | Root | 19.629 |
| SRR9715743 | Root | 16.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.706 |
| SRR8749028 | MeJA induced 9h | 47.157 |
| SRR8749029 | MeJA induced 9h | 30.966 |
| SRR8749030 | Uninduced | 17.844 |
| SRR8749031 | Uninduced | 69.816 |
| SRR8749032 | Uninduced | 41.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.049 |
| SRR8400027 | Control - Root | 29.119 |