Gene detail information of Glyur003313s00045220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19660.2 | 3.00E-07 | Wound-responsive family protein |
| NR | XP_004500994.1 | 2.23E-11 | PREDICTED: bifunctional nuclease 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q93VH2|BBD2_ARATH | 3.00E-08 | Bifunctional nuclease 2 |
| trEMBL | tr|I3S6T2|I3S6T2_MEDTR | 3.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:AFK35974.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03313 | 3379 | 4975 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.334 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 0.438 |
| SRR1811619 | moderate drought stress | 0.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.121 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.539 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.078 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.167 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.184 |
| SRR2868004 | Drought Stress (root) | 0.588 |
| SRR2967015 | Control (root) | 0.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.505 |
| SRR9715740 | Leaf | 0.934 |
| SRR9715741 | Leaf | 1.077 |
| SRR9715739 | Root | 0.072 |
| SRR9715742 | Root | 0.049 |
| SRR9715743 | Root | 0.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.155 |
| SRR8749028 | MeJA induced 9h | 0.072 |
| SRR8749029 | MeJA induced 9h | 0.275 |
| SRR8749030 | Uninduced | 0.461 |
| SRR8749031 | Uninduced | 2.468 |
| SRR8749032 | Uninduced | 2.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.135 |
| SRR8400027 | Control - Root | 0.099 |