Gene detail information of Glyur003300s00041892 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003552697.1 | 8.29E-23 | PREDICTED: uncharacterized protein LOC100790544 [Glycine max] |
| trEMBL | tr|I1MZ81|I1MZ81_SOYBN | 3.00E-23 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03300 | 18889 | 19392 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.943 |
| SRR1783600 | control | 0.957 |
| SRR1783602 | moderate drought stress | 0.206 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.001 |
| SRR2868004 | Drought Stress (root) | 0.095 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.262 |
| SRR9715741 | Leaf | 0.121 |
| SRR9715739 | Root | 3.844 |
| SRR9715742 | Root | 3.041 |
| SRR9715743 | Root | 4.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1671.772 |
| SRR8749028 | MeJA induced 9h | 2697.511 |
| SRR8749029 | MeJA induced 9h | 898.230 |
| SRR8749030 | Uninduced | 19991.336 |
| SRR8749031 | Uninduced | 4341.477 |
| SRR8749032 | Uninduced | 21759.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 122.084 |
| SRR8400027 | Control - Root | 31.947 |