Gene detail information of Glyur003300s00041890 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G05950.1 | 1.00E-42 | maternal effect embryo arrest 60 |
| NR | XP_004503212.1 | 1.48E-91 | PREDICTED: uncharacterized protein LOC101504387 [Cicer arietinum] |
| trEMBL | tr|I1MZ70|I1MZ70_SOYBN | 1.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G03620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03300 | 13954 | 14487 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 118.811 |
| SRR1783600 | control | 119.460 |
| SRR1783602 | moderate drought stress | 85.146 |
| SRR1811619 | moderate drought stress | 84.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.160 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 64.686 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.490 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.851 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 83.994 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 82.985 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.965 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.109 |
| SRR2868004 | Drought Stress (root) | 50.037 |
| SRR2967015 | Control (root) | 52.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.744 |
| SRR9715740 | Leaf | 13.277 |
| SRR9715741 | Leaf | 14.934 |
| SRR9715739 | Root | 96.922 |
| SRR9715742 | Root | 47.775 |
| SRR9715743 | Root | 59.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.834 |
| SRR8749028 | MeJA induced 9h | 30.678 |
| SRR8749029 | MeJA induced 9h | 30.791 |
| SRR8749030 | Uninduced | 15.574 |
| SRR8749031 | Uninduced | 7.707 |
| SRR8749032 | Uninduced | 18.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 53.955 |
| SRR8400027 | Control - Root | 52.672 |