Gene detail information of Glyur003293s00040625 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03345.1 | 2.00E-36 | |
| NR | NP_001235816.1 | 2.28E-57 | uncharacterized protein LOC100305468 [Glycine max] |
| Swissprot | tr|Q2HIM5|MMGT_ARATH | 7.00E-46 | Membrane magnesium transporter (Precursor) |
| trEMBL | tr|C6SV70|C6SV70_SOYBN | 9.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G20670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03293 | 20073 | 23109 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003293s00040625.1 | PF10270.4 | MMgT | 8 | 98 | 6.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.741 |
| SRR1783600 | control | 9.937 |
| SRR1783602 | moderate drought stress | 8.750 |
| SRR1811619 | moderate drought stress | 9.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.792 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.061 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.383 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.429 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.650 |
| SRR2868004 | Drought Stress (root) | 5.003 |
| SRR2967015 | Control (root) | 1.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.198 |
| SRR9715740 | Leaf | 2.540 |
| SRR9715741 | Leaf | 13.831 |
| SRR9715739 | Root | 1.284 |
| SRR9715742 | Root | 12.572 |
| SRR9715743 | Root | 11.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.937 |
| SRR8400027 | Control - Root | 22.776 |