Gene detail information of Glyur003287s00046394 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G17540.1 | 1.00E-57 | HXXXD-type acyl-transferase family protein |
| NR | XP_003549135.1 | 4.36E-118 | PREDICTED: 13-hydroxylupanine O-tigloyltransferase-like [Glycine max] |
| Swissprot | tr|Q5H873|HLTT_LUPAL | 4.00E-97 | 13-hydroxylupanine O-tigloyltransferase |
| trEMBL | tr|I1MQ63|I1MQ63_SOYBN | 2.00E-118 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G32670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03287 | 2241 | 4737 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003287s00046394.1 | PF02458.10 | Transferase | 15 | 286 | 5.60E-54 |
| Glyur003287s00046394.1 | PF02458.10 | Transferase | 299 | 390 | 1.50E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.834 |
| SRR1783600 | control | 0.954 |
| SRR1783602 | moderate drought stress | 0.348 |
| SRR1811619 | moderate drought stress | 0.416 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.450 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.086 |
| SRR2868004 | Drought Stress (root) | 0.042 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 61.867 |
| SRR9715740 | Leaf | 30.095 |
| SRR9715741 | Leaf | 22.973 |
| SRR9715739 | Root | 1.162 |
| SRR9715742 | Root | 0.671 |
| SRR9715743 | Root | 1.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.419 |
| SRR8400027 | Control - Root | 1.071 |