Gene detail

Gene detail information of Glyur003284s00042901.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G48310.1	4.00E-100	cytochrome P450, family 71, subfamily A, polypeptide 22
NR	AES98625.2	0	cytochrome P450 family 71 protein [Medicago truncatula]
COG	YP_003270382.1	8.00E-29	cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprot	tr\|H2DH18\|C7A12_PANGI	0	Cytochrome P450 CYP736A12
trEMBL	tr\|G7KE81\|G7KE81_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES98625.2}

Sequence

Transcript Sequence

>Glyur003284s00042901.1
GCAAAACTACTAAACATGTCTTATGCGGCAATAGCAATGCATGCTTTCCTCCTATTCATTTTCATGTACCTTCTATACACAATCTTGTGGCATTCAAAACAGAGAAAAAGGCCANCAGGTCCGCTAGCTTTGCCAATTATTGGGAACCTCCACATGTTAGGTACCCTTCCGCATCGCAANCTTCACTCCTTATCCAAAAAATATGGCCCTATCATGTCCTTGCAACTTGGACAAGTCCCAACTATTGTGGTTTCCTCCACTGAGTCCGCTGAGTTNTTCCTCAAAACCCACGACTCCATTTTTGCAAGCCGCCCAAAGACTCAAGTAACTCAGCTCTTGTTCTATGGCTCCAAGGGCTTGGCGTTCTCTGAGTATGGTCCATACTTAAGCAACCTAAAGAAGTTGTGCACTTTACACCTTCTTAGCACATCAAAAGTTGAGCACTTTGCTCCTATTAGAANGGAGCAATTAGGTCTCCTGGTGAAGTCATTGAAGAAAGCCGCCACGGTTGGTCAGGTTGTGAACCTTACTGAGGCTGTCGGGAACCTTACAGAGGATATAGTGTATAAGACAATATTGGGGCGCACTAAGTCTGAACAATTTGATTTGAAGACAACAGTTCGTGAAGCACTAGTATTGTTAGGAGCTTTTAATCTGGCTGATTATNTGCCTTGGCTAGGCGCATTTGATCTTCAGATAATAACTGAGCATGAACAAGCTGCTAATGTTGACACAAGGCATCGTAAAGAAGACTTTGTAGACATATTGCTCTCAATGATACATCAAACTATAGATCTTCGGGGTGAACAAAATGATCGTATTGATCGAACTAACATCAAGGCTATTTTACTAGATATGATTATGGCTGGAGTTGATACGATTACTGCTGCGATCGAGTGGGCTATGTCAGAACTTCTGAGGCACCCAAGGGTGATGAAAAAACTTCAAGATGAGATAGAGAATGAAGTAGGAATTATGAGAATGGTGGAAGAGACGGATTTGATGAAGTTGAGTTACTTGAAAATGGTGGTGGATGAGACCTTAAGACTTTATCCTGTTGGGCCCTTACTTATCCCTCATGAATCAAAAGAAAGTATCACAATTGATGGTTATCATATAAAGAAGAAGACAAGAGTCATAATAAATGCTTGGGCAATAGGGCGGGATCCTAATGTGTGGTCAGATAATGCTGAAACATATTATCCAGAGAGATTTATCAAGAAGAAAATAAATTACCATGGACAAGACTTTGAATCTATACCATTTGGTTCTGGTCGTAGACGTTGTCCTGGGATTCAAATGGGTTTGATTACTGTTAGGTTACTTGTAGCTCAATTGGTGCATTGCTTTAATTGGGAGCTTCCATCTAATGTTAGTCCTGCCAACTTGAATATGCAGGAGAATTTTGGACTCTCAATGCCAAGAGCTGAGCAATTGCATGCAATACCAACTTATCGTTTAGCTAGTGATGCTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03284	5037	6867	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71A22

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003284s00042901.1	PF00067.17	p450	33	469	4.30E-89

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	124.729
SRR1783600	control	126.554
SRR1783602	moderate drought stress	70.976
SRR1811619	moderate drought stress	71.913

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.562
DRR006520	Root Summer glycyrrhizin high producing strain	24.057
DRR006521	Root Winter glycyrrhizin high producing strain	2.398
DRR006522	Root Winter glycyrrhizin high producing strain	2.595
DRR006523	Root Summer glycyrrhizin low producing strain	1.554
DRR006524	Root Summer glycyrrhizin low producing strain	1.608
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.765
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.756

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.222
SRR2868004	Drought Stress (root)	34.974
SRR2967015	Control (root)	66.170

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	48.081
SRR9715740	Leaf	43.305
SRR9715741	Leaf	65.515
SRR9715739	Root	1.653
SRR9715742	Root	13.513
SRR9715743	Root	11.418

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.895
SRR8749028	MeJA induced 9h	4.460
SRR8749029	MeJA induced 9h	0.396
SRR8749030	Uninduced	37.122
SRR8749031	Uninduced	9.401
SRR8749032	Uninduced	21.369

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.136
SRR8400027	Control - Root	24.420