Gene detail

Gene detail information of Glyur003277s00039416

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35160.1	3.00E-25	O-methyltransferase family protein
NR	KHN08844.1	6.96E-143	8-hydroxyquercetin 8-O-methyltransferase [Glycine soja]
COG	YP_006433319.1	1.00E-22	methylase involved in ubiquinone/menaquinone biosynthesis [Flexibacter litoralis DSM 6794]
Swissprot	tr\|B6VJS4\|ROMT_VITVI	4.00E-104	Trans-resveratrol di-O-methyltransferase
trEMBL	tr\|I1JJX3\|I1JJX3_SOYBN	2.00E-141	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA0335S00200.1}

Sequence

Transcript Sequence

>Glyur003277s00039416.1
ATGCCACTCTCAAAACTCATTGATTCACTACCAATCCATCCTTCTAAAAGCGGTAACATTTATCGTTTAATGCGAATTATGACGCATTCTGGCTTCTTCTCTCAACAAAATGTCACAGAGAATGAGCTAGAAGTGGAGTATATGTCGAGTGATGCATCAATGCTACTACTTAAGAATCATCCCTTAAGTATGACAGCATATTTACATCTCGCGCTTGATCCAACTCATATAAACGTAGGGCATCATTTGTCTACTTGGTTCCAAAATGATGATACTACACCATTTGAAACGACATATGGGATGTTGCTTTGGGATTATACTGGACGTAATCCCTTGCTTAACAAATTGTTCATTGATGCCATGGCAAGCAACGCTCCATTTATTGCTAGTATGGTGATTGAAAAGTGCAAAGGTGTGTTCGATGGATTGAAGTCATTGGTTGATGTTGGGGGAGTCACAGGGACCATGGCAAAGGCCATTGCCAACTCATTCCCACAACTAGAGTGTATTGTTTTGGACCTCCCGCATGTTGTTGCTGGCTTACAAGGAAGTGAGAACCTAAAGTATGTTGGAGGGGGACATTCGATATTGCATGCTTGGAATGATGCGAAATGTATGGATATATTGAAGAAATGCAAAGAAGCAATAATGAGCAAAGGCAAAGTAGGGAAGATAATTATNATAGACATTGTGATGGAGAATGACATGGGGGACGATGAATCAGTTGAAACACAACTCTCGTTTGATATGCTAATGATGATTTTGCTCAACGGAAAGGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTTCGTCAGCTGGTTTTAGTGACTACAAGATAACTTCGATTTTGGGATCAACATCTATCATTGAGATCTATCCATAATGATATAGTCAAATGGTTGTATATTATTTTTGGCTCAAGATTTATCATTGAGATCTATCCAGAAAGGGTCATCACTCTAATCATTTATATATGCAATGTCATGATTTATGTTATTTGTGTCACTAGGGAATGTTTAATATTTTCACTATGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold03277	7262	9563	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0008168 methyltransferase activity

GO:0008171 O-methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur003277s00039416.1	PF00891.13	Methyltransf_2	46	192	1.50E-34
Glyur003277s00039416.1	PF00891.13	Methyltransf_2	195	270	3.20E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.178
SRR1811619	moderate drought stress	0.216

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	50.281
DRR006526	Leaf Summer glycyrrhizin high producing strain	53.612

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.298
SRR2868004	Drought Stress (root)	0.486
SRR2967015	Control (root)	0.697

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.680
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.203
SRR9715739	Root	0.000
SRR9715742	Root	0.060
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.008
SRR8400027	Control - Root	0.008