Gene detail information of Glyur003276s00039398 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39740.1 | 2.00E-56 | Nucleotidyltransferase family protein |
| NR | KHN07594.1 | 5.77E-83 | Poly(A) RNA polymerase, mitochondrial [Glycine soja] |
| trEMBL | tr|V7D1Q2|V7D1Q2_PHAVU | 1.00E-82 | Uncharacterized protein {ECO:0000313|EMBL:ESW35455.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03276 | 395 | 1821 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.410 |
| SRR1783600 | control | 5.739 |
| SRR1783602 | moderate drought stress | 3.572 |
| SRR1811619 | moderate drought stress | 2.448 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.339 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.642 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.726 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.903 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.398 |
| SRR2868004 | Drought Stress (root) | 6.613 |
| SRR2967015 | Control (root) | 6.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.417 |
| SRR9715740 | Leaf | 3.479 |
| SRR9715741 | Leaf | 1.218 |
| SRR9715739 | Root | 1.016 |
| SRR9715742 | Root | 2.009 |
| SRR9715743 | Root | 1.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.194 |
| SRR8749028 | MeJA induced 9h | 9.652 |
| SRR8749029 | MeJA induced 9h | 3.245 |
| SRR8749030 | Uninduced | 2.599 |
| SRR8749031 | Uninduced | 1.308 |
| SRR8749032 | Uninduced | 0.619 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.364 |
| SRR8400027 | Control - Root | 6.217 |