Gene detail information of Glyur003264s00042805 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G50910.1 | 3.00E-59 | |
| NR | XP_004517039.1 | 0 | PREDICTED: uncharacterized protein LOC101503726 [Cicer arietinum] |
| trEMBL | tr|G7IW53|G7IW53_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AES68942.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold03264 | 19070 | 25857 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur003264s00042805.1 | PF14780.1 | DUF4477 | 11 | 164 | 1.70E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.993 |
| SRR1783600 | control | 5.908 |
| SRR1783602 | moderate drought stress | 5.911 |
| SRR1811619 | moderate drought stress | 5.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.756 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.712 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.240 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.348 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.580 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.379 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.701 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.737 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.538 |
| SRR2868004 | Drought Stress (root) | 13.517 |
| SRR2967015 | Control (root) | 12.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.266 |
| SRR9715740 | Leaf | 8.186 |
| SRR9715741 | Leaf | 6.787 |
| SRR9715739 | Root | 2.117 |
| SRR9715742 | Root | 5.895 |
| SRR9715743 | Root | 4.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.497 |
| SRR8749028 | MeJA induced 9h | 24.086 |
| SRR8749029 | MeJA induced 9h | 27.455 |
| SRR8749030 | Uninduced | 12.591 |
| SRR8749031 | Uninduced | 10.524 |
| SRR8749032 | Uninduced | 14.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.921 |
| SRR8400027 | Control - Root | 11.892 |